Tuesday, May 31, 2011

Find empty results of a cluster job

 find dir/ -type f -size 0 -name *.o*

Sunday, May 22, 2011

was macht eigentlich der cluster fuer mich?

qstat|grep  "username     r"|wc -l

Thursday, May 19, 2011

Transparent Points using Gnuplot and Tikz terminal

Insert this in your tikz drawing generated by gnuplot:

\tikzstyle{every path} = [opacity=.5]
\tikzstyle{every node} = [opacity=1]

Saturday, May 7, 2011

Draw nice RNA 2d structures in PGF/TikZ

Vienna package - RNAplot:
RNAplot -o svg

change colours in inkscape if desired

transform inkscape svg to pgf/tikz code:
inkscape2tikz -o output.tex input.svg

change tikz code, e.g. add
\tikzstyle{every node} = [fill=white]
for better readability, and delete
line width = XXX
for standard line width

Remove background rectangle
 \path[draw=white,fill=white,rounded corners=0.0000cm] (0.0000,0.0000) rectangle  (452.0000,452.0000);